Pop1 - Revision history

Rsalter: /* Conclusion */

2022-02-21T18:32:23Z

Conclusion

← Older revision		Revision as of 18:32, 21 February 2022
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	*If RAMs are included, visit the RAM portal to view their descriptions.		*If RAMs are included, visit the RAM portal to view their descriptions.
	*If RPL and/or Javascript and/or R scripts are included, they should be documented, either in the on-board documentation or in a supplemental document reached by the Ramp URL.		*If RPL and/or Javascript and/or R scripts are included, they should be documented, either in the on-board documentation or in a supplemental document reached by the Ramp URL.

			<hr>

Rsalter: /* Conclusion */

2022-02-21T18:32:07Z

Conclusion

← Older revision		Revision as of 18:32, 21 February 2022
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	==Conclusion==		==Conclusion==
	This simple population model has been used to demonstrate the various novel features of Numerus Studio as a simulation platform. ~~In summary, the key points~~ are:		This simple population model has been used to demonstrate the various novel features of Numerus Studio as a simulation platform. Successful use of Numerus Studio requires good documentation. Ramp designers are expected to provide such documentation either on board or through supplemental documents.

	*When opening a new Ramp always visit the '''About This Ramp...''' documentation to understand the landscape of the underlying model.		*When opening a new Ramp always visit the '''About This Ramp...''' documentation to understand the landscape of the underlying model.
	*If RAMs are included, visit the RAM portal to view their descriptions.		*If RAMs are included, visit the RAM portal to view their descriptions.
	*If an RPL or Javascript ~~program is~~ included it should be documented ~~as well~~, either in the on-board documentation or in a supplemental document reached by the Ramp URL~~. Similarly, for supplemental R scripts~~.		*If RPL and/or Javascript and/or R scripts are included, they should be documented, either in the on-board documentation or in a supplemental document reached by the Ramp URL.

Rsalter: /* Using R */

2022-02-21T18:29:36Z

Using R

← Older revision		Revision as of 18:29, 21 February 2022
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	[[File:RprogGraph.png\|thumb\|center\|500px\|Fig. 7 Graph of <code>plot_mstd(mode=3)</code>]]		[[File:RprogGraph.png\|thumb\|center\|500px\|Fig. 7 Graph of <code>plot_mstd(mode=3)</code>]]

			==Conclusion==
			This simple population model has been used to demonstrate the various novel features of Numerus Studio as a simulation platform. In summary, the key points are:

			*When opening a new Ramp always visit the '''About This Ramp...''' documentation to understand the landscape of the underlying model.
			*If RAMs are included, visit the RAM portal to view their descriptions.
			*If an RPL or Javascript program is included it should be documented as well, either in the on-board documentation or in a supplemental document reached by the Ramp URL. Similarly, for supplemental R scripts.

Rsalter: /* Using R */

2022-02-21T18:20:54Z

Using R

← Older revision		Revision as of 18:20, 21 February 2022
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	[[File:Rprog1.png\|thumb\|center\|500px\|Fig. 7 R program]]		[[File:Rprog1.png\|thumb\|center\|500px\|Fig. 7 R program]]

	The <code>runit</code> function duplicates the Javascript function of the same name. The key element providing the interaction between R and the Pop1 Ramp is the '''nmbR''' package function '''nmbR$iterate_v'''<ref>Package documentation can be viewed in R studio by entering '''nmbR''' into the help textfield</ref> on line 25. This function captures the behavior of the Javascript looping structure. Parameters <code>prelude</code>, <code>interlude</code> and <code>postlude</code> represent RPL instruction strings that are sent, respectively, at the beginning of the run, between each loop, and at the end of run (if any are NULL nothing is sent). At the end of the run the time sequence of one or more variables is retrieved and represented as an R dataframe. You can view this result by loading ~~the~~		The <code>runit</code> function duplicates the Javascript function of the same name. The key element providing the interaction between R and the Pop1 Ramp is the '''nmbR''' package function '''nmbR$iterate_v'''<ref>Package documentation can be viewed in R studio by entering '''nmbR''' into the help textfield</ref> on line 25. This function captures the behavior of the Javascript looping structure. Parameters <code>prelude</code>, <code>interlude</code> and <code>postlude</code> represent RPL instruction strings that are sent, respectively, at the beginning of the run, between each loop, and at the end of run (if any are NULL nothing is sent). At the end of the run the time sequence of one or more variables is retrieved and represented as an R dataframe. You can view this result by loading '''Pop1.R''' and executing <code>runit()</code>, with zero or more choices for mode, etc. Also try <code>runit_mstd</code> and <code>plot_mstd</code>.

			[[File:RprogGraph.png\|thumb\|center\|500px\|Fig. 7 Graph of <code>plot_mstd(mode=3)</code>]]

Rsalter: /* Using R */

2022-02-21T18:15:52Z

Using R

← Older revision		Revision as of 18:15, 21 February 2022
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	As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through the '''nmbR''' package downloadable from the [https://www.numerusinc.com/studio Studio Website].		As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through the '''nmbR''' package downloadable from the [https://www.numerusinc.com/studio Studio Website].

	Below is a demo program using '''nmbR'''~~. It~~ duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of ~~the mean and~~ mean ± standard deviation.		Below is a demo program '''Pop1.R'' using '''nmbR''' that duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run, and computation and plotting of mean ± standard deviation.

	[[File:Rprog1.png\|thumb\|center\|500px\|Fig. 7 R program]]		[[File:Rprog1.png\|thumb\|center\|500px\|Fig. 7 R program]]

			The <code>runit</code> function duplicates the Javascript function of the same name. The key element providing the interaction between R and the Pop1 Ramp is the '''nmbR''' package function '''nmbR$iterate_v'''<ref>Package documentation can be viewed in R studio by entering '''nmbR''' into the help textfield</ref> on line 25. This function captures the behavior of the Javascript looping structure. Parameters <code>prelude</code>, <code>interlude</code> and <code>postlude</code> represent RPL instruction strings that are sent, respectively, at the beginning of the run, between each loop, and at the end of run (if any are NULL nothing is sent). At the end of the run the time sequence of one or more variables is retrieved and represented as an R dataframe. You can view this result by loading the

Rsalter: /* Using R */

2022-02-21T17:47:30Z

Using R

← Older revision		Revision as of 17:47, 21 February 2022
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	Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.		Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.

	[[File:Rprog1\|thumb\|center\|500px\|Fig. 7 R program]]		[[File:Rprog1.png\|thumb\|center\|500px\|Fig. 7 R program]]

Rsalter: /* Using R */

2022-02-21T17:46:49Z

Using R

← Older revision		Revision as of 17:46, 21 February 2022
Line 107:		Line 107:
	Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.		Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.

	[[File:~~rprog2~~\|thumb\|center\|500px\|Fig. 7 R program]]		[[File:Rprog1\|thumb\|center\|500px\|Fig. 7 R program]]

Rsalter: /* Using R */

2022-02-21T17:46:04Z

Using R

← Older revision		Revision as of 17:46, 21 February 2022
Line 107:		Line 107:
	Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.		Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.

	[[File:~~rprog1~~\|thumb\|center\|500px\|Fig. 7 R program]]		[[File:rprog2\|thumb\|center\|500px\|Fig. 7 R program]]

Rsalter: /* Using R */

2022-02-21T17:43:54Z

Using R

← Older revision		Revision as of 17:43, 21 February 2022
Line 103:		Line 103:

	==Using R==		==Using R==
	As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through a package downloadable from the [https://www.numerusinc.com/studio Studio Website].		As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through the '''nmbR''' package downloadable from the [https://www.numerusinc.com/studio Studio Website].

			Below is a demo program using '''nmbR'''. It duplicates the functionality of the Javascript program described above, adding to it data retrieval after the run and plotting of the mean and mean ± standard deviation.

			[[File:rprog1\|thumb\|center\|500px\|Fig. 7 R program]]

Rsalter: /* Using R */

2022-02-21T17:21:40Z

Using R

← Older revision		Revision as of 17:21, 21 February 2022
Line 103:		Line 103:

	==Using R==		==Using R==
	As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through a package downloadable from the [https://www.numerusinc.com/studio\|Studio Website].		As described in the [[The_Ramp_API#Remote_API_Access\|User Guide]], the RPL API can be access remotely from most other platforms; including R, Javascript and Python. Numerus has simplified integration with the R platform through a package downloadable from the [https://www.numerusinc.com/studio Studio Website].